Pseudomonas aeruginosa PAO1, PA4772
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CATCCGCACC-N11-GGTGCGGATG | 5358153 | 5358183 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GGTAGGGCGAA-N65-TTCGCCCTACC | 5361254 | 5361340 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GGTAGGGCGAA-N65-TTCGCCCTACC | 5361254 | 5361340 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: TTCGCCCTACC-N14-GGTAGGGCGAA | 5361330 | 5361365 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GTAGGGCGAATA-N61-TATTCGCCCTAC | 5361356 | 5361440 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Shine-Dalgarno sequence | 5361575 | 5361579 | + |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |