Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PR00039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PR00039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 94 | 292 | 2.5E-24 |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 6 | 61 | 2.2E-17 |
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 88 | 291 | 7.45E-39 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 167 | 264 | 6.6E-58 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 32 | 42 | 3.8E-6 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 42 | 53 | 3.8E-6 |
CDD | cd08459 | PBP2_DntR_NahR_LinR_like | - | - | 96 | 292 | 1.87271E-75 |
PANTHER | PTHR30118 | HTH-TYPE TRANSCRIPTIONAL REGULATOR LEUO-RELATED | - | - | 2 | 294 | 1.9E-89 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 1 | 87 | 1.9E-21 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 21 | 32 | 3.8E-6 |
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 2 | 86 | 7.48E-21 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 89 | 288 | 6.6E-58 |