Pseudomonas aeruginosa PAO1, PA4974
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CACCGGTAGC-N83-GCTACCGGTG | 5584047 | 5584149 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Shine-Dalgarno sequence | 5583654 | 5583658 | - |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CACCGGTAGC-N83-GCTACCGGTG | 5584047 | 5584149 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: AGCCAAGACGCCCCCG-N2-CGGGGGCGTCTTGGCT | 5585554 | 5585587 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GCGGCTGGAGCAG-N9-CTGCTCCAGCCGC | 5585626 | 5585660 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 1355 | 5585555 | 5585586 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |