Pseudomonas aeruginosa PAO1, PA5011 (waaC)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Cellular Component	GO:0009276	Gram-negative-bacterium-type cell wall	IDA Inferred from Direct Assay	ECO:0000002 direct assay evidence
Molecular Function	GO:0071968	lipid A-core heptosyltransferase activity	ISS Inferred from Sequence or Structural Similarity Term mapped from: UniProtKB:P26469	ECO:0000250 sequence similarity evidence used in manual assertion	9171387	Reviewed by curator
Biological Process	GO:0009244	lipopolysaccharide core region biosynthetic process	IDA Inferred from Direct Assay	ECO:0000314 direct assay evidence used in manual assertion	9171387	Reviewed by curator
Biological Process	GO:0009103	lipopolysaccharide biosynthetic process	IDA Inferred from Direct Assay	ECO:0000002 direct assay evidence
Molecular Function	GO:0008705	methionine synthase activity	ISS Inferred from Sequence or Structural Similarity	ECO:0000044 sequence similarity evidence
Molecular Function	GO:0016757	transferase activity, transferring glycosyl groups	ISS Inferred from Sequence or Structural Similarity Term mapped from: CAZy:GT9	ECO:0000250 sequence similarity evidence used in manual assertion	18838391	Reviewed by curator
Molecular Function	GO:0008920	lipopolysaccharide heptosyltransferase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR02193	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016757	transferase activity, transferring glycosyl groups	ISM Inferred from Sequence Model Term mapped from: InterPro:cd03789	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0009244	lipopolysaccharide core region biosynthetic process	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR02193	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Cell wall / LPS / capsule Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pae00540	Lipopolysaccharide biosynthesis	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pae01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
PseudoCAP		Lipopolysaccharide biosynthesis		ECO:0000037 not_recorded

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:3.40.50.2000	Glycogen Phosphorylase B;	-	-	167	349	7.3E-43
Pfam	PF01075	Glycosyltransferase family 9 (heptosyltransferase)	IPR002201	Glycosyl transferase, family 9	75	314	1.1E-84
FunFam	G3DSA:3.40.50.2000:FF:000106	Lipopolysaccharide heptosyltransferase 1	-	-	166	317	9.3E-72
SUPERFAMILY	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase	-	-	1	348	3.45E-84
PANTHER	PTHR30160	TETRAACYLDISACCHARIDE 4'-KINASE-RELATED	-	-	1	348	2.7E-69
Gene3D	G3DSA:3.40.50.2000	Glycogen Phosphorylase B;	-	-	1	163	1.4E-44
NCBIfam	TIGR02193	JCVI: lipopolysaccharide heptosyltransferase I	IPR011908	Lipopolysaccharide heptosyltransferase I	2	296	9.9E-113
CDD	cd03789	GT9_LPS_heptosyltransferase	IPR002201	Glycosyl transferase, family 9	2	346	1.38179E-68

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.