Pseudomonas aeruginosa PAO1, PA5029
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| OxyR binding site | 5660239 | 5660253 | - |
ECO:0000314
direct assay evidence used in manual assertion |
22275523 | Details |
| Shine-Dalgarno sequence | 5660188 | 5660192 | - |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GGTCATCGCC-N50-GGCGATGACC | 5659489 | 5659558 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Shine-Dalgarno sequence | 5659193 | 5659196 | - |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |