Pseudomonas aeruginosa PAO1, PA5121

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008381 mechanosensitive ion channel activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30460
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF82689
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00924
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF82861 Mechanosensitive channel protein MscS (YggB), transmembrane region IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 463 545 1.44E-13
SUPERFAMILY SSF50182 Sm-like ribonucleoproteins IPR010920 LSM domain superfamily 547 610 1.83E-12
Pfam PF00924 Mechanosensitive ion channel IPR006685 Mechanosensitive ion channel MscS 504 703 6.0E-39
PANTHER PTHR30460 UNCHARACTERIZED IPR045276 Mechanosensitive ion channel YbiO 12 732 0.0
Gene3D G3DSA:3.30.70.100 - - - 614 702 2.4E-17
Gene3D G3DSA:1.10.287.1260 - - - 444 561 3.2E-27
FunFam G3DSA:2.30.30.60:FF:000001 MscS Mechanosensitive ion channel - - 562 611 1.8E-17
FunFam G3DSA:1.10.287.1260:FF:000005 Mechanosensitive ion channel family protein - - 442 561 2.2E-35
MobiDBLite mobidb-lite consensus disorder prediction - - 714 735 -
SUPERFAMILY SSF82689 Mechanosensitive channel protein MscS (YggB), C-terminal domain IPR011066 Mechanosensitive ion channel MscS, C-terminal 612 712 7.72E-12
Gene3D G3DSA:2.30.30.60 - IPR023408 Mechanosensitive ion channel MscS, beta-domain superfamily 563 611 4.9E-14
FunFam G3DSA:3.30.70.100:FF:000018 MscS mechanosensitive ion channel - - 613 702 5.8E-29

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.