Pseudomonas aeruginosa PAO1, PA5135

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0005975 carbohydrate metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF88713
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR30105 UNCHARACTERIZED YIBQ-RELATED IPR006837 Divergent polysaccharide deacetylase 14 249 1.7E-78
CDD cd10936 CE4_DAC2 IPR006837 Divergent polysaccharide deacetylase 33 241 3.20529E-87
SUPERFAMILY SSF88713 Glycoside hydrolase/deacetylase IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel 31 242 1.22E-65
Pfam PF04748 Divergent polysaccharide deacetylase IPR006837 Divergent polysaccharide deacetylase 35 241 1.0E-72
Gene3D G3DSA:3.20.20.370 Glycoside hydrolase/deacetylase - - 17 251 1.3E-76

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.