Pseudomonas aeruginosa PAO1, PA5159

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0046677 response to antibiotic
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Biological Process GO:0006810 transport
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00529
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Antibiotic resistance and susceptibility Other PAO1 genes in this class
Transport of small molecules Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.287.470 Helix hairpin bin - - 115 183 3.6E-9
SUPERFAMILY SSF56954 Outer membrane efflux proteins (OEP) - - 17 206 3.92E-7
PANTHER PTHR30386 MEMBRANE FUSION SUBUNIT OF EMRAB-TOLC MULTIDRUG EFFLUX PUMP - - 12 382 1.3E-69
Gene3D G3DSA:2.40.50.100 - - - 55 113 1.3E-7
Coils Coil Coil - - 155 175 -
Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain 55 286 4.8E-16
FunFam G3DSA:2.40.30.170:FF:000003 Multidrug resistance protein A - - 227 348 3.5E-55
SUPERFAMILY SSF111369 HlyD-like secretion proteins - - 163 263 1.2E-9
Pfam PF00529 Cation efflux system protein CusB domain 1 IPR043602 Cation efflux system protein CusB, domain 1 33 341 7.4E-15
Gene3D G3DSA:2.40.30.170 - - - 225 346 2.4E-34

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.