Pseudomonas aeruginosa PAO1, PA5181
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CGGCGCCGGC-N59-GCCGGCGCCG | 5832719 | 5832797 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| AmrZ binding site | 5834087 | 5834099 | + |
ECO:0000314
direct assay evidence used in manual assertion |
24603766 | Details |
| Inverted repeat: CGGCGCCGGC-N59-GCCGGCGCCG | 5832719 | 5832797 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GGCCTGGGCG-N7-CGCCCAGGCC | 5834144 | 5834170 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: ACGCCGCCTCCTG-N3-CAGGAGGCGGCGT | 5835083 | 5835111 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 1423 | 5835084 | 5835110 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |