Pseudomonas aeruginosa PAO1, PA5319 (radC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

DNA replication, recombination, modification and repair Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR00608 JCVI: DNA repair protein RadC IPR001405 Uncharacterised protein family UPF0758 11 224 3.9E-73
Gene3D G3DSA:3.40.140.10 Cytidine Deaminase, domain 2 - - 101 224 1.1E-39
PANTHER PTHR30471 DNA REPAIR PROTEIN RADC IPR001405 Uncharacterised protein family UPF0758 1 224 3.2E-80
SUPERFAMILY SSF47781 RuvA domain 2-like IPR010994 RuvA domain 2-like 18 90 1.04E-8
SUPERFAMILY SSF102712 JAB1/MPN domain - - 122 197 2.09E-5
Pfam PF04002 RadC-like JAB domain IPR025657 RadC-like JAB domain 104 222 4.3E-43
FunFam G3DSA:3.40.140.10:FF:000032 DNA repair protein RadC - - 101 224 4.7E-59
Pfam PF20582 UPF0758 N-terminal IPR046778 UPF0758, N-terminal 3 80 6.3E-28
CDD cd08071 MPN_DUF2466 IPR025657 RadC-like JAB domain 107 219 1.05156E-57

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.