Pseudomonas aeruginosa PAO1, PA5356 (glcC)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISS Inferred from Sequence or Structural Similarity	ECO:0000044 sequence similarity evidence
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00392	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00392	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SMART	SM00895	FCD_2	IPR011711	GntR, C-terminal	94	225	3.4E-26
PRINTS	PR00035	GntR bacterial regulatory protein HTH signature	IPR000524	Transcription regulator HTH, GntR	29	43	2.9E-7
SUPERFAMILY	SSF48008	GntR ligand-binding domain-like	IPR008920	Transcription regulator FadR/GntR, C-terminal	91	232	1.14E-26
PANTHER	PTHR43537	TRANSCRIPTIONAL REGULATOR, GNTR FAMILY	-	-	3	236	2.0E-45
SUPERFAMILY	SSF46785	Winged helix DNA-binding domain	IPR036390	Winged helix DNA-binding domain superfamily	3	73	5.81E-20
Pfam	PF07729	FCD domain	IPR011711	GntR, C-terminal	94	224	2.2E-26
Gene3D	G3DSA:1.20.120.530	-	IPR008920	Transcription regulator FadR/GntR, C-terminal	93	233	1.8E-33
Pfam	PF00392	Bacterial regulatory proteins, gntR family	IPR000524	Transcription regulator HTH, GntR	7	69	2.9E-16
PRINTS	PR00035	GntR bacterial regulatory protein HTH signature	IPR000524	Transcription regulator HTH, GntR	43	59	2.9E-7
Gene3D	G3DSA:1.10.10.10	-	IPR036388	Winged helix-like DNA-binding domain superfamily	1	75	1.1E-20
SMART	SM00345	gntr3	IPR000524	Transcription regulator HTH, GntR	10	69	5.8E-13
Coils	Coil	Coil	-	-	216	246	-
CDD	cd07377	WHTH_GntR	IPR000524	Transcription regulator HTH, GntR	6	70	7.36694E-19

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.