Pseudomonas aeruginosa PAO1, PA5553 (atpC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: UniProtKB:P0A6E6
 ECO:0000250
sequence similarity evidence used in manual assertion		 6238948 Reviewed by curator
Molecular Function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: UniProtKB:P0A6E6
 ECO:0000250
sequence similarity evidence used in manual assertion		 6238948 Reviewed by curator
Molecular Function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01216
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01216
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015986 ATP synthesis coupled proton transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01216
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Energy metabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCyc PWY-7219 adenosine ribonucleotides de novo biosynthesis 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae00190 Oxidative phosphorylation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Oxidative phosphorylation ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_00530 ATP synthase epsilon chain [atpC]. IPR001469 ATP synthase, F1 complex, delta/epsilon subunit 3 131 19.494915
Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain IPR020547 ATP synthase epsilon subunit, C-terminal domain 89 132 1.7E-6
FunFam G3DSA:2.60.15.10:FF:000001 ATP synthase epsilon chain - - 1 90 7.5E-38
Gene3D G3DSA:2.60.15.10 - IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal 3 90 6.5E-28
CDD cd12152 F1-ATPase_delta IPR001469 ATP synthase, F1 complex, delta/epsilon subunit 6 115 2.40579E-31
NCBIfam TIGR01216 JCVI: ATP synthase F1 subunit epsilon IPR001469 ATP synthase, F1 complex, delta/epsilon subunit 4 133 1.3E-44
Gene3D G3DSA:1.20.5.440 - - - 91 133 1.5E-10
SUPERFAMILY SSF46604 Epsilon subunit of F1F0-ATP synthase C-terminal domain IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily 89 137 2.48E-11
SUPERFAMILY SSF51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal 4 86 9.55E-24
Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal 6 84 8.3E-30
PANTHER PTHR13822 ATP SYNTHASE DELTA/EPSILON CHAIN IPR001469 ATP synthase, F1 complex, delta/epsilon subunit 6 130 1.8E-22

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.