Pseudomonas aeruginosa PAO1, PA5565 (gidA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0050660 flavin adenine dinucleotide binding
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: UniProtKB:P0A6U3
 ECO:0000250
sequence similarity evidence used in manual assertion		 17062623 Reviewed by curator
Biological Process GO:0030488 tRNA methylation
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: UniProtKB:P0A6U3
 ECO:0000250
sequence similarity evidence used in manual assertion		 17062623 Reviewed by curator
Biological Process GO:0002098 tRNA wobble uridine modification
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: UniProtKB:P0A6U3
 ECO:0000250
sequence similarity evidence used in manual assertion		 17062623 Reviewed by curator
Biological Process GO:0008033 tRNA processing
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR11806
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0050660 flavin adenine dinucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR11806
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0002098 tRNA wobble uridine modification
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00129
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Cell division Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF13932 tRNA modifying enzyme MnmG/GidA C-terminal domain IPR026904 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG, C-terminal 402 614 4.6E-77
FunFam G3DSA:1.10.10.1800:FF:000001 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG - - 459 548 4.2E-26
SUPERFAMILY SSF51905 FAD/NAD(P)-binding domain IPR036188 FAD/NAD(P)-binding domain superfamily 7 261 1.43E-52
Pfam PF01134 Glucose inhibited division protein A IPR040131 MnmG, N-terminal domain 8 399 0.0
Gene3D G3DSA:3.50.50.60 - IPR036188 FAD/NAD(P)-binding domain superfamily 294 458 4.0E-57
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 148 166 8.4E-5
Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 5 622 42.546913
PANTHER PTHR11806 GLUCOSE INHIBITED DIVISION PROTEIN A IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related 6 625 0.0
Gene3D G3DSA:1.10.150.570 - IPR044920 tRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal subdomain superfamily 567 619 7.6E-24
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 9 28 8.4E-5
FunFam G3DSA:3.50.50.60:FF:000002 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG - - 295 458 3.1E-86
FunFam G3DSA:1.10.150.570:FF:000001 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG - - 567 620 4.4E-23
SMART SM01228 GIDA_assoc_3_2 IPR047001 tRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal subdomain 544 615 1.5E-41
NCBIfam TIGR00136 JCVI: tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 7 620 0.0
Gene3D G3DSA:1.10.10.1800 - - - 459 557 2.2E-26
Gene3D G3DSA:3.50.50.60 - IPR036188 FAD/NAD(P)-binding domain superfamily 2 232 9.5E-88
FunFam G3DSA:3.50.50.60:FF:000010 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG - - 2 233 3.2E-128

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.