Pseudomonas fluorescens Pf0-1, Pfl01_2373

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009446 putrescine biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR31377
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004668 protein-arginine deiminase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR31377
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfo01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfo00330 Arginine and proline metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR01409 JCVI: twin-arginine translocation signal domain IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal 3 29 0.0013
Gene3D G3DSA:3.75.10.10 - - - 32 372 7.8E-114
PANTHER PTHR31377 AGMATINE DEIMINASE-RELATED IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type 38 372 6.2E-86
SUPERFAMILY SSF55909 Pentein - - 36 372 5.0E-112
Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type 41 371 8.2E-101

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.