Pseudomonas fluorescens Pf0-1, Pfl01_5299
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0005975 | carbohydrate metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03133
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Molecular Function | GO:0016831 | carboxy-lyase activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03133
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.90.226.10 | - | - | - | 4 | 239 | 2.9E-48 |
| Pfam | PF01039 | Carboxyl transferase domain | IPR034733 | Acetyl-CoA carboxylase | 17 | 234 | 2.3E-15 |
| PANTHER | PTHR42995 | ACETYL-COENZYME A CARBOXYLASE CARBOXYL TRANSFERASE SUBUNIT BETA, CHLOROPLASTIC | - | - | 16 | 225 | 1.1E-24 |
| SUPERFAMILY | SSF52096 | ClpP/crotonase | IPR029045 | ClpP/crotonase-like domain superfamily | 6 | 229 | 9.95E-38 |
| NCBIfam | TIGR03133 | JCVI: biotin-independent malonate decarboxylase subunit beta | IPR017556 | Biotin-independent malonate decarboxylase, beta subunit | 11 | 281 | 2.9E-119 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.