Pseudomonas fluorescens F113, PSF113_0248 (ygdP)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pfe03018	RNA degradation	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Hamap	MF_00298	RNA pyrophosphohydrolase [rppH].	IPR022927	RNA pyrophosphohydrolase RppH	1	156	37.605438
PRINTS	PR00502	NUDIX hydrolase family signature	IPR020476	NUDIX hydrolase	47	62	1.5E-6
SUPERFAMILY	SSF55811	Nudix	IPR015797	NUDIX hydrolase-like domain superfamily	4	156	6.5E-32
CDD	cd03671	Ap4A_hydrolase_plant_like	IPR022927	RNA pyrophosphohydrolase RppH	6	151	5.29113E-69
FunFam	G3DSA:3.90.79.10:FF:000001	RNA pyrophosphohydrolase	-	-	1	159	3.1E-91
PANTHER	PTHR43736	ADP-RIBOSE PYROPHOSPHATASE	-	-	2	151	2.9E-16
Gene3D	G3DSA:3.90.79.10	Nucleoside Triphosphate Pyrophosphohydrolase	-	-	1	157	2.7E-46
PRINTS	PR00502	NUDIX hydrolase family signature	IPR020476	NUDIX hydrolase	33	47	1.5E-6
Pfam	PF00293	NUDIX domain	IPR000086	NUDIX hydrolase domain	7	146	2.8E-26

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.