Pseudomonas fluorescens F113, PSF113_1600 (ccmE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_1600
Name
ccmE
Replicon chromosome
Genomic location 1858472 - 1859227 (+ strand)

Cross-References

RefSeq YP_005207019.1
GI 378949531
Entrez 11829689
INSDC AEV61624.1
NCBI Locus Tag PSF113_1600
UniParc UPI00023B456F
UniProtKB Acc G8Q0Q9
UniProtKB ID G8Q0Q9_PSEFL
UniRef100 UniRef100_G8Q0Q9
UniRef50 UniRef50_P52222
UniRef90 UniRef90_C3K4Y8

Product

Feature Type CDS
Coding Frame 1
Product Name
protein CcmE
Synonyms
Evidence for Translation
Charge (pH 7) 8.58
Kyte-Doolittle Hydrophobicity Value 0.694
Molecular Weight (kDa) 27.9
Isoelectric Point (pI) 9.78

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 259 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001392 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_1600
Search term: ccmE
Search term: protein CcmE

Human Homologs

References

No references are associated with this feature.