Pseudomonas fluorescens F113, PSF113_2359

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0051536	iron-sulfur cluster binding	ISM Inferred from Sequence Model Term mapped from: InterPro:G3DSA:1.10.1060.10	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016491	oxidoreductase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF07992	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pfe00770	Pantothenate and CoA biosynthesis	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfe01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfe00410	beta-Alanine metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfe00240	Pyrimidine metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF51971	Nucleotide-binding domain	-	-	139	381	1.06E-46
SUPERFAMILY	SSF46548	alpha-helical ferredoxin	-	-	12	151	2.09E-28
PANTHER	PTHR43073	DIHYDROPYRIMIDINE DEHYDROGENASE [NADP(+)]	-	-	18	448	6.2E-69
PRINTS	PR00368	FAD-dependent pyridine nucleotide reductase signature	-	-	401	423	8.3E-21
Gene3D	G3DSA:3.50.50.60	-	IPR036188	FAD/NAD(P)-binding domain superfamily	139	260	3.2E-27
PRINTS	PR00469	Pyridine nucleotide disulphide reductase class-II signature	-	-	411	429	1.1E-10
PRINTS	PR00368	FAD-dependent pyridine nucleotide reductase signature	-	-	276	294	8.3E-21
Gene3D	G3DSA:3.50.50.60	-	IPR036188	FAD/NAD(P)-binding domain superfamily	263	380	2.3E-13
PRINTS	PR00469	Pyridine nucleotide disulphide reductase class-II signature	-	-	142	164	1.1E-10
Gene3D	G3DSA:3.50.50.60	-	IPR036188	FAD/NAD(P)-binding domain superfamily	386	449	3.3E-8
Pfam	PF07992	Pyridine nucleotide-disulphide oxidoreductase	IPR023753	FAD/NAD(P)-binding domain	141	437	9.9E-33
PRINTS	PR00368	FAD-dependent pyridine nucleotide reductase signature	-	-	372	388	8.3E-21
PRINTS	PR00469	Pyridine nucleotide disulphide reductase class-II signature	-	-	272	296	1.1E-10
SUPERFAMILY	SSF51971	Nucleotide-binding domain	-	-	358	448	7.53E-11
Pfam	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster	IPR028261	Dihydroprymidine dehydrogenase domain II	21	127	1.7E-33
PRINTS	PR00368	FAD-dependent pyridine nucleotide reductase signature	-	-	143	162	8.3E-21
Gene3D	G3DSA:1.10.1060.10	-	IPR009051	Alpha-helical ferredoxin	6	138	1.1E-33

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.