Pseudomonas fluorescens F113, PSF113_3699 (hxcR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02533
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015628 protein secretion by the type II secretion system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02533
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0015627 type II protein secretion system complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02533
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfe03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.40.50.300:FF:000398 Type IV pilus assembly ATPase PilB - - 219 480 1.9E-110
Gene3D G3DSA:3.30.450.90 - - - 85 218 5.8E-47
FunFam G3DSA:3.30.450.90:FF:000001 Type II secretion system ATPase GspE - - 86 218 1.9E-53
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 99 478 1.89E-100
Pfam PF00437 Type II/IV secretion system protein IPR001482 Type II/IV secretion system domain 120 386 1.6E-98
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 219 480 4.0E-108
Gene3D G3DSA:3.30.300.160 - IPR037257 Type II secretion system protein GspE, N-terminal superfamily 4 84 2.6E-10
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 247 368 2.7E-5
NCBIfam TIGR02533 JCVI: type II secretion system ATPase GspE IPR013369 Type II secretion system protein GspE 11 478 0.0
PANTHER PTHR30258 TYPE II SECRETION SYSTEM PROTEIN GSPE-RELATED - - 63 479 2.8E-126
SUPERFAMILY SSF160246 EspE N-terminal domain-like IPR037257 Type II secretion system protein GspE, N-terminal superfamily 12 73 3.4E-8
CDD cd01129 PulE-GspE-like - - 239 386 4.95825E-92

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.