Pseudomonas fluorescens F113, PSF113_5330
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| CDD | cd05233 | SDR_c | - | - | 5 | 213 | 4.98084E-51 |
| PIRSF | PIRSF000126 | 11-beta-HSD1 | - | - | 1 | 260 | 2.3E-69 |
| PRINTS | PR00080 | Short-chain dehydrogenase/reductase (SDR) superfamily signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 152 | 171 | 3.3E-9 |
| PRINTS | PR00081 | Glucose/ribitol dehydrogenase family signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 4 | 21 | 7.2E-21 |
| PRINTS | PR00081 | Glucose/ribitol dehydrogenase family signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 126 | 142 | 7.2E-21 |
| PANTHER | PTHR44196 | DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 7B | - | - | 3 | 257 | 4.5E-56 |
| Gene3D | G3DSA:3.40.50.720 | - | - | - | 2 | 242 | 1.1E-57 |
| SMART | SM00822 | This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. | - | - | 3 | 186 | 0.003 |
| PRINTS | PR00081 | Glucose/ribitol dehydrogenase family signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 152 | 171 | 7.2E-21 |
| PRINTS | PR00081 | Glucose/ribitol dehydrogenase family signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 173 | 190 | 7.2E-21 |
| PRINTS | PR00080 | Short-chain dehydrogenase/reductase (SDR) superfamily signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 132 | 140 | 3.3E-9 |
| PRINTS | PR00081 | Glucose/ribitol dehydrogenase family signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 79 | 90 | 7.2E-21 |
| SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | IPR036291 | NAD(P)-binding domain superfamily | 3 | 254 | 1.05E-57 |
| Pfam | PF00106 | short chain dehydrogenase | IPR002347 | Short-chain dehydrogenase/reductase SDR | 4 | 194 | 2.5E-43 |
| PRINTS | PR00080 | Short-chain dehydrogenase/reductase (SDR) superfamily signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 79 | 90 | 3.3E-9 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.