Pseudomonas fluorescens SBW25, PFLU1408

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016829 lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00701
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 76 94 1.2E-11
SMART SM01130 DHDPS_2 IPR002220 DapA-like 5 289 1.5E-90
SUPERFAMILY SSF51569 Aldolase - - 2 289 3.24E-82
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 108 124 1.2E-11
PIRSF PIRSF001365 DHDPS IPR002220 DapA-like 1 290 1.3E-76
CDD cd00408 DHDPS-like - - 9 289 4.27071E-94
Gene3D G3DSA:3.20.20.70 Aldolase class I IPR013785 Aldolase-type TIM barrel 5 290 2.1E-83
Pfam PF00701 Dihydrodipicolinate synthetase family IPR002220 DapA-like 6 289 9.5E-50
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 40 61 1.2E-11
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 133 150 1.2E-11
PANTHER PTHR42849 N-ACETYLNEURAMINATE LYASE - - 1 289 2.2E-53

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.