Pseudomonas fluorescens SBW25, PFLU1545 (norM)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0042910 xenobiotic transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00797
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00797
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015297 antiporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00797
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00797
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR43298 MULTIDRUG RESISTANCE PROTEIN NORM-RELATED - - 17 458 9.1E-99
NCBIfam TIGR00797 JCVI: MATE family efflux transporter IPR002528 Multi antimicrobial extrusion protein 27 422 5.5E-108
PIRSF PIRSF006603 DinF IPR002528 Multi antimicrobial extrusion protein 14 463 2.1E-71
Pfam PF01554 MatE IPR002528 Multi antimicrobial extrusion protein 253 413 1.8E-35
CDD cd13131 MATE_NorM_like - - 17 447 0.0
Pfam PF01554 MatE IPR002528 Multi antimicrobial extrusion protein 27 186 3.9E-39

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.