Pseudomonas fluorescens SBW25, PFLU2416

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Cellular Component	GO:0015627	type II protein secretion system complex	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00885	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0015628	protein secretion by the type II secretion system	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00885	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
NCBIfam	TIGR01708	JCVI: type II secretion system minor pseudopilin GspH	IPR002416	Type II secretion system protein GspH	3	146	6.1E-24
PRINTS	PR00885	Bacterial general secretion pathway protein H signature	IPR002416	Type II secretion system protein GspH	1	15	5.0E-7
Pfam	PF07963	Prokaryotic N-terminal methylation motif	IPR012902	Prokaryotic N-terminal methylation site	1	25	4.1E-10
Pfam	PF12019	Type II transport protein GspH	IPR022346	General secretion pathway, GspH	41	134	9.2E-5
SUPERFAMILY	SSF54523	Pili subunits	IPR045584	Pilin-like	6	100	2.28E-12
Gene3D	G3DSA:3.55.40.10	minor pseudopilin epsh domain	-	-	35	147	4.1E-9
Coils	Coil	Coil	-	-	34	54	-
NCBIfam	TIGR02532	JCVI: prepilin-type N-terminal cleavage/methylation domain	IPR012902	Prokaryotic N-terminal methylation site	3	25	2.1E-9
PRINTS	PR00885	Bacterial general secretion pathway protein H signature	IPR002416	Type II secretion system protein GspH	16	30	5.0E-7

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.