Pseudomonas fluorescens SBW25, PFLU3786
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0008033 | tRNA processing |
Inferred from Sequence Model
Term mapped from: InterPro:MF_01850
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR43686 | SULFURTRANSFERASE-RELATED | - | - | 7 | 261 | 1.1E-87 |
| Hamap | MF_01850 | tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. | IPR012089 | tRNA-cytidine(32) 2-sulfurtransferase | 1 | 264 | 57.288967 |
| CDD | cd01993 | Alpha_ANH_like_II | - | - | 34 | 209 | 7.73617E-71 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | - | - | 10 | 228 | 1.64E-54 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold | 4 | 267 | 1.2E-48 |
| PIRSF | PIRSF004976 | ATPase_YdaO | IPR035107 | tRNA thiolation protein, TtcA/Ctu1 type | 2 | 272 | 1.4E-70 |
| Pfam | PF01171 | PP-loop family | IPR011063 | tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal | 34 | 197 | 4.0E-14 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.