Pseudomonas fluorescens SBW25, PFLU5647 (purU)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008864 formyltetrahydrofolate deformylase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR42706
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009058 biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00551
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006189 'de novo' IMP biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR42706
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
UniPathway UPA00074 IMP biosynthesis via de novo pathway InterPro 5.8-49.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion 		0
KEGG (InterPro) 00630 Glyoxylate and dicarboxylate metabolism InterPro 5.8-49.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion 		0
KEGG (InterPro) 00670 One carbon pool by folate InterPro 5.8-49.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion 		0
KEGG (InterPro) 00970 Aminoacyl-tRNA biosynthesis InterPro 5.8-49.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion 		0

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01575 Formyltetrahydrofolate deformylase signature IPR004810 Formyltetrahydrofolate deformylase 42 54 8.1E-48
Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. IPR004810 Formyltetrahydrofolate deformylase 5 285 43.753834
PRINTS PR01575 Formyltetrahydrofolate deformylase signature IPR004810 Formyltetrahydrofolate deformylase 91 113 8.1E-48
PRINTS PR01575 Formyltetrahydrofolate deformylase signature IPR004810 Formyltetrahydrofolate deformylase 237 259 8.1E-48
PRINTS PR01575 Formyltetrahydrofolate deformylase signature IPR004810 Formyltetrahydrofolate deformylase 113 140 8.1E-48
SUPERFAMILY SSF53328 Formyltransferase IPR036477 Formyl transferase, N-terminal domain superfamily 91 284 3.01E-58
NCBIfam TIGR00655 JCVI: formyltetrahydrofolate deformylase IPR004810 Formyltetrahydrofolate deformylase 9 285 2.5E-87
Gene3D G3DSA:3.40.50.170 - - - 90 285 6.3E-56
PRINTS PR01575 Formyltetrahydrofolate deformylase signature IPR004810 Formyltetrahydrofolate deformylase 259 284 8.1E-48
Gene3D G3DSA:3.30.70.260 - - - 1 88 6.8E-24
PANTHER PTHR42706 FORMYLTETRAHYDROFOLATE DEFORMYLASE IPR004810 Formyltetrahydrofolate deformylase 6 285 1.8E-83
Pfam PF00551 Formyl transferase IPR002376 Formyl transferase, N-terminal 91 266 6.3E-37
SUPERFAMILY SSF55021 ACT-like IPR045865 ACT-like domain 7 84 1.37E-8
CDD cd08648 FMT_core_Formyl-FH4-Hydrolase_C IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain 90 285 6.77252E-120
PRINTS PR01575 Formyltetrahydrofolate deformylase signature IPR004810 Formyltetrahydrofolate deformylase 10 36 8.1E-48
CDD cd04875 ACT_F4HF-DF IPR044074 Formyltetrahydrofolate deformylase, ACT domain 9 79 1.72613E-24
PIRSF PIRSF036480 FormyFH4_hydr - - 5 285 9.8E-99

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.