Pseudomonas putida GB-1, PputGB1_0348

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0016491	oxidoreductase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF07992	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0046653	tetrahydrofolate metabolic process	ISM Inferred from Sequence Model Term mapped from: InterPro:PIRSF037980	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0008115	sarcosine oxidase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PIRSF037980	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0005515	protein binding	ISM Inferred from Sequence Model Term mapped from: InterPro:G3DSA:3.30.1360.120	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	ppg00260	Glycine, serine and threonine metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	ppg01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
NCBIfam	TIGR01372	JCVI: sarcosine oxidase subunit alpha family protein	IPR006277	Sarcosine oxidase, alpha subunit	2	1004	0.0
PRINTS	PR00469	Pyridine nucleotide disulphide reductase class-II signature	-	-	172	194	4.4E-14
PIRSF	PIRSF037980	Sarcos_oxid_alpha	IPR006277	Sarcosine oxidase, alpha subunit	1	1004	0.0
Gene3D	G3DSA:3.50.50.60	-	IPR036188	FAD/NAD(P)-binding domain superfamily	295	423	2.6E-24
PRINTS	PR00469	Pyridine nucleotide disulphide reductase class-II signature	-	-	460	478	4.4E-14
PRINTS	PR00368	FAD-dependent pyridine nucleotide reductase signature	-	-	283	301	4.5E-12
SUPERFAMILY	SSF101790	Aminomethyltransferase beta-barrel domain	IPR029043	Glycine cleavage T-protein/YgfZ, C-terminal	906	1002	4.41E-16
PRINTS	PR00368	FAD-dependent pyridine nucleotide reductase signature	-	-	173	192	4.5E-12
PRINTS	PR00368	FAD-dependent pyridine nucleotide reductase signature	-	-	450	472	4.5E-12
Gene3D	G3DSA:3.30.1360.120	Probable tRNA modification gtpase trme; domain 1	IPR027266	GTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1	614	1004	6.5E-126
Pfam	PF13510	2Fe-2S iron-sulfur cluster binding domain	-	-	17	102	6.9E-22
PANTHER	PTHR43757	AMINOMETHYLTRANSFERASE	IPR028896	Aminomethyltransferase-like	606	995	5.2E-58
Pfam	PF17806	Sarcosine oxidase A3 domain	IPR041117	SoxA, A3 domain	521	604	2.2E-30
Pfam	PF07992	Pyridine nucleotide-disulphide oxidoreductase	IPR023753	FAD/NAD(P)-binding domain	172	486	3.2E-14
SUPERFAMILY	SSF103025	Folate-binding domain	-	-	613	895	8.95E-92
PRINTS	PR00469	Pyridine nucleotide disulphide reductase class-II signature	-	-	373	389	4.4E-14
Gene3D	G3DSA:3.10.20.440	-	IPR042204	2Fe-2S iron-sulfur cluster binding domain, N-terminal	10	104	2.5E-21
PRINTS	PR00469	Pyridine nucleotide disulphide reductase class-II signature	-	-	284	292	4.4E-14
Pfam	PF01571	Aminomethyltransferase folate-binding domain	IPR006222	Aminomethyltransferase, folate-binding domain	619	884	1.8E-73
SUPERFAMILY	SSF51905	FAD/NAD(P)-binding domain	IPR036188	FAD/NAD(P)-binding domain superfamily	167	473	1.27E-38
Gene3D	G3DSA:3.50.50.60	-	IPR036188	FAD/NAD(P)-binding domain superfamily	172	483	2.6E-24
Pfam	PF08669	Glycine cleavage T-protein C-terminal barrel domain	IPR013977	Glycine cleavage T-protein, C-terminal barrel domain	910	996	4.4E-17

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.