Pseudomonas putida GB-1, PputGB1_1255 (cysM)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0004124	cysteine synthase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01138	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006535	cysteine biosynthetic process from serine	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01138	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	ppg01230	Biosynthesis of amino acids	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	ppg01120	Microbial metabolism in diverse environments	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	ppg00270	Cysteine and methionine metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	ppg01130	Biosynthesis of antibiotics	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	ppg01110	Biosynthesis of secondary metabolites	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	ppg01200	Carbon metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	ppg00920	Sulfur metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	ppg01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
FunFam	G3DSA:3.40.50.1100:FF:000003	Cystathionine beta-synthase	-	-	55	163	1.2E-43
SUPERFAMILY	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes	IPR036052	Tryptophan synthase beta chain-like, PALP domain superfamily	18	309	1.01E-90
Coils	Coil	Coil	-	-	129	149	-
PANTHER	PTHR10314	CYSTATHIONINE BETA-SYNTHASE	-	-	21	310	2.2E-93
NCBIfam	TIGR01138	JCVI: cysteine synthase B	IPR005858	Cysteine synthase CysM	20	309	0.0
Pfam	PF00291	Pyridoxal-phosphate dependent enzyme	IPR001926	Tryptophan synthase beta chain-like, PALP domain	22	298	2.3E-67
Gene3D	G3DSA:3.40.50.1100	-	IPR036052	Tryptophan synthase beta chain-like, PALP domain superfamily	52	170	2.2E-111
NCBIfam	TIGR01136	JCVI: cysteine synthase	IPR005856	Cysteine synthase	22	309	1.9E-123
Gene3D	G3DSA:3.40.50.1100	-	IPR036052	Tryptophan synthase beta chain-like, PALP domain superfamily	21	306	2.2E-111
FunFam	G3DSA:3.40.50.1100:FF:000029	Cysteine synthase	-	-	164	306	3.0E-73
CDD	cd01561	CBS_like	-	-	26	305	0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.