Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0045893 | positive regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02424
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02424
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0019619 | 3,4-dihydroxybenzoate catabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02424
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 5 | 115 | 3.8E-22 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 97 | 301 | 7.8E-31 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 97 | 282 | 2.9E-28 |
PANTHER | PTHR30419 | HTH-TYPE TRANSCRIPTIONAL REGULATOR YBHD | - | - | 6 | 302 | 7.4E-54 |
NCBIfam | TIGR02424 | JCVI: pca operon transcription factor PcaQ | IPR012787 | Pca transcription factor PcaQ | 5 | 301 | 2.7E-112 |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 10 | 67 | 2.6E-19 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 171 | 275 | 2.9E-28 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 24 | 35 | 3.7E-7 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 35 | 45 | 3.7E-7 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 45 | 56 | 3.7E-7 |
FunFam | G3DSA:1.10.10.10:FF:000001 | LysR family transcriptional regulator | - | - | 7 | 90 | 6.0E-20 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 2 | 89 | 6.2E-23 |
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 97 | 305 | 2.71E-34 |