Pseudomonas putida GB-1, PputGB1_3554

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00829
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppg01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppg01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppg00626 Naphthalene degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppg00350 Tyrosine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppg01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppg01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppg00625 Chloroalkane and chloroalkene degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppg00071 Fatty acid degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppg00010 Glycolysis / Gluconeogenesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppg01220 Degradation of aromatic compounds 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.720 - - - 146 283 3.9E-126
Gene3D G3DSA:3.90.180.10 - - - 25 331 3.9E-126
CDD cd08297 CAD3 - - 1 334 0.0
Pfam PF08240 Alcohol dehydrogenase GroES-like domain IPR013154 Alcohol dehydrogenase-like, N-terminal 25 131 2.8E-29
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains IPR036291 NAD(P)-binding domain superfamily 135 302 3.38E-39
SUPERFAMILY SSF50129 GroES-like IPR011032 GroES-like superfamily 1 169 1.22E-46
FunFam G3DSA:3.40.50.720:FF:000039 Alcohol dehydrogenase AdhP - - 145 283 3.1E-48
PANTHER PTHR42940 ALCOHOL DEHYDROGENASE 1-RELATED - - 5 334 7.2E-101
Pfam PF00107 Zinc-binding dehydrogenase IPR013149 Alcohol dehydrogenase-like, C-terminal 172 298 8.8E-27
SMART SM00829 PKS_ER_names_mod IPR020843 Polyketide synthase, enoylreductase domain 9 332 1.4E-6

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.