Pseudomonas putida GB-1, PputGB1_3894

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0017004 cytochrome complex assembly
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01578
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015232 heme transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01386
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01386
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0020037 heme binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01578
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015886 heme transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01386
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppg02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature IPR003557 Cytochrome c-type biogenesis protein CcmC 124 144 1.0E-58
Pfam PF01578 Cytochrome C assembly protein IPR002541 Cytochrome c assembly protein 16 187 7.1E-27
PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature IPR003557 Cytochrome c-type biogenesis protein CcmC 159 185 1.0E-58
PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature IPR003557 Cytochrome c-type biogenesis protein CcmC 65 85 1.0E-58
PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature IPR003557 Cytochrome c-type biogenesis protein CcmC 48 65 1.0E-58
NCBIfam TIGR01191 JCVI: heme ABC transporter permease CcmC IPR003557 Cytochrome c-type biogenesis protein CcmC 48 231 1.5E-82
PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature IPR003557 Cytochrome c-type biogenesis protein CcmC 207 231 1.0E-58
PANTHER PTHR30071 HEME EXPORTER PROTEIN C IPR045062 Cytochrome c-type biogenesis protein CcsA/CcmC 33 203 1.2E-32
PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature IPR003557 Cytochrome c-type biogenesis protein CcmC 103 123 1.0E-58

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.