Pseudomonas putida GB-1, PputGB1_4151

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.25.40.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
MobiDBLite mobidb-lite consensus disorder prediction - - 237 257 -
SMART SM00671 sel1 IPR006597 Sel1-like repeat 83 118 5.3E-8
MobiDBLite mobidb-lite consensus disorder prediction - - 167 206 -
Pfam PF08238 Sel1 repeat IPR006597 Sel1-like repeat 120 154 1.4E-6
MobiDBLite mobidb-lite consensus disorder prediction - - 344 365 -
Gene3D G3DSA:1.25.40.10 Tetratricopeptide repeat domain IPR011990 Tetratricopeptide-like helical domain superfamily 8 199 7.4E-50
SMART SM00671 sel1 IPR006597 Sel1-like repeat 13 46 4.6
SMART SM00671 sel1 IPR006597 Sel1-like repeat 119 154 9.9E-7
SMART SM00671 sel1 IPR006597 Sel1-like repeat 47 82 1.8E-10
MobiDBLite mobidb-lite consensus disorder prediction - - 185 206 -
Pfam PF08238 Sel1 repeat IPR006597 Sel1-like repeat 83 117 2.6E-5
SUPERFAMILY SSF81901 HCP-like - - 16 164 2.01E-35
Pfam PF08238 Sel1 repeat IPR006597 Sel1-like repeat 32 46 0.017
MobiDBLite mobidb-lite consensus disorder prediction - - 237 275 -
Pfam PF08238 Sel1 repeat IPR006597 Sel1-like repeat 47 82 1.3E-7
MobiDBLite mobidb-lite consensus disorder prediction - - 349 365 -
PANTHER PTHR45011 DAP3-BINDING CELL DEATH ENHANCER 1 - - 106 164 5.8E-35

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.