Pseudomonas putida GB-1, PputGB1_4376

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005525 GTP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00315
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003924 GTPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00315
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR01393 JCVI: translation elongation factor 4 IPR006297 Elongation factor 4 3 594 0.0
SUPERFAMILY SSF54980 EF-G C-terminal domain-like IPR035647 EF-G domain III/V-like 400 493 4.32E-25
CDD cd16260 EF4_III - - 293 368 1.02604E-46
Pfam PF00679 Elongation factor G C-terminus IPR000640 Elongation factor EFG, domain V-like 400 484 2.0E-20
Gene3D G3DSA:3.30.70.870 Elongation Factor G (Translational Gtpase), domain 3 - - 286 367 2.7E-36
Gene3D G3DSA:3.30.70.240 - - - 368 477 1.1E-36
PRINTS PR00315 GTP-binding elongation factor signature IPR000795 Translational (tr)-type GTP-binding domain 74 84 8.6E-14
SUPERFAMILY SSF54980 EF-G C-terminal domain-like IPR035647 EF-G domain III/V-like 292 370 2.41E-18
PRINTS PR00315 GTP-binding elongation factor signature IPR000795 Translational (tr)-type GTP-binding domain 126 135 8.6E-14
FunFam G3DSA:3.30.70.2570:FF:000001 Translation factor GUF1, mitochondrial - - 479 553 5.3E-35
CDD cd03699 EF4_II - - 191 276 1.75562E-39
Gene3D G3DSA:2.40.30.10 Translation factors - - 186 285 2.3E-33
CDD cd01890 LepA - - 5 183 1.05874E-124
Hamap MF_00071 Elongation factor 4 [lepA]. IPR006297 Elongation factor 4 1 596 302.191772
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 2 229 7.61E-55
FunFam G3DSA:3.30.70.870:FF:000004 Translation factor GUF1, mitochondrial - - 286 367 5.3E-37
PANTHER PTHR43512 TRANSLATION FACTOR GUF1-RELATED IPR006297 Elongation factor 4 2 593 0.0
Pfam PF03144 Elongation factor Tu domain 2 IPR004161 Translation elongation factor EFTu-like, domain 2 205 275 3.0E-8
Gene3D G3DSA:3.30.70.2570 - IPR038363 LepA, C-terminal domain superfamily 479 553 6.5E-33
Pfam PF06421 GTP-binding protein LepA C-terminus IPR013842 GTP-binding protein LepA, C-terminal 487 593 5.4E-50
NCBIfam TIGR00231 JCVI: small GTP-binding protein domain IPR005225 Small GTP-binding protein domain 6 173 7.2E-18
CDD cd03709 lepA_C IPR035654 Elongation factor 4, domain IV 401 479 3.99657E-41
FunFam G3DSA:3.40.50.300:FF:000078 Elongation factor 4 - - 1 185 6.5E-90
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 1 185 6.4E-62
PRINTS PR00315 GTP-binding elongation factor signature IPR000795 Translational (tr)-type GTP-binding domain 90 101 8.6E-14
Pfam PF00009 Elongation factor Tu GTP binding domain IPR000795 Translational (tr)-type GTP-binding domain 3 181 1.0E-51
PRINTS PR00315 GTP-binding elongation factor signature IPR000795 Translational (tr)-type GTP-binding domain 49 57 8.6E-14
PRINTS PR00315 GTP-binding elongation factor signature IPR000795 Translational (tr)-type GTP-binding domain 6 19 8.6E-14
FunFam G3DSA:2.40.30.10:FF:000015 Translation factor GUF1, mitochondrial - - 186 284 3.9E-33
FunFam G3DSA:3.30.70.240:FF:000007 Translation factor GUF1, mitochondrial - - 368 477 1.6E-35

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.