Pseudomonas putida GB-1, PputGB1_4626

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009446 putrescine biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR31377
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004668 protein-arginine deiminase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR31377
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppg01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppg00330 Arginine and proline metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR31377 AGMATINE DEIMINASE-RELATED IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type 34 368 1.2E-88
Gene3D G3DSA:3.75.10.10 - - - 27 369 1.6E-115
Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type 37 367 2.3E-102
Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal 1 25 4.3E-5
SUPERFAMILY SSF55909 Pentein - - 33 368 2.14E-111

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.