Pseudomonas putida GB-1, PputGB1_5387 (aspA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008797 aspartate ammonia-lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00839
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48557
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006099 tricarboxylic acid cycle
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF10415
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016829 lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF10415
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006531 aspartate metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00839
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppg00250 Alanine, aspartate and glutamate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppg01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.40.30 - - - 424 479 1.3E-17
Pfam PF10415 Fumarase C C-terminus IPR018951 Fumarase C, C-terminal 424 476 5.2E-20
Pfam PF00206 Lyase IPR022761 Fumarate lyase, N-terminal 26 358 6.2E-101
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 287 314 1.4E-28
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 195 213 1.4E-28
FunFam G3DSA:1.10.40.30:FF:000002 Fumarate hydratase class II - - 424 479 2.0E-17
CDD cd01357 Aspartase - - 19 470 0.0
Gene3D G3DSA:1.10.275.10 - IPR024083 Fumarase/histidase, N-terminal 19 154 1.4E-52
FunFam G3DSA:1.20.200.10:FF:000001 Fumarate hydratase, mitochondrial - - 155 422 4.5E-114
PANTHER PTHR42696 ASPARTATE AMMONIA-LYASE - - 17 481 0.0
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 333 349 1.4E-28
Gene3D G3DSA:1.20.200.10 Fumarase/aspartase (Central domain) - - 155 423 3.9E-81
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 150 168 1.4E-28
NCBIfam TIGR00839 JCVI: aspartate ammonia-lyase IPR004708 Aspartate ammonia-lyase 19 479 0.0
SUPERFAMILY SSF48557 L-aspartase-like IPR008948 L-Aspartase-like 18 476 0.0
FunFam G3DSA:1.10.275.10:FF:000001 Fumarate hydratase, mitochondrial - - 19 154 8.7E-53

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.