Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 10 | 69 | 1.4E-21 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 1 | 90 | 4.5E-26 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 104 | 293 | 3.8E-46 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 25 | 36 | 1.2E-10 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 166 | 266 | 3.8E-46 |
CDD | cd08432 | PBP2_GcdR_TrpI_HvrB_AmpR_like | - | - | 97 | 293 | 3.86656E-58 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 36 | 46 | 1.2E-10 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 92 | 295 | 1.6E-33 |
NCBIfam | TIGR03418 | JCVI: putative choline sulfate-utilization transcription factor | IPR017786 | Transcription factor, choline sulphate-utilisation, putative | 8 | 296 | 0.0 |
FunFam | G3DSA:1.10.10.10:FF:000001 | LysR family transcriptional regulator | - | - | 8 | 91 | 4.0E-23 |
PANTHER | PTHR30537 | HTH-TYPE TRANSCRIPTIONAL REGULATOR | - | - | 7 | 296 | 7.6E-70 |
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 93 | 296 | 3.44E-36 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 46 | 57 | 1.2E-10 |
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 7 | 87 | 3.35E-23 |