Pseudomonas putida S16, PPS_0172

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00721
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005886 plasma membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10264
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Coils Coil Coil - - 128 148 -
PRINTS PR00721 Stomatin signature IPR001972 Stomatin/HflK family 29 51 1.4E-63
PRINTS PR00721 Stomatin signature IPR001972 Stomatin/HflK family 174 195 1.4E-63
PRINTS PR00721 Stomatin signature IPR001972 Stomatin/HflK family 155 173 1.4E-63
PRINTS PR00721 Stomatin signature IPR001972 Stomatin/HflK family 199 222 1.4E-63
SUPERFAMILY SSF117892 Band 7/SPFH domain IPR036013 Band 7/SPFH domain superfamily 53 186 1.83E-44
PRINTS PR00721 Stomatin signature IPR001972 Stomatin/HflK family 131 154 1.4E-63
Pfam PF01145 SPFH domain / Band 7 family IPR001107 Band 7 domain 27 195 1.7E-33
FunFam G3DSA:3.30.479.30:FF:000004 Putative membrane protease family, stomatin - - 58 171 1.9E-43
PRINTS PR00721 Stomatin signature IPR001972 Stomatin/HflK family 111 128 1.4E-63
PRINTS PR00721 Stomatin signature IPR001972 Stomatin/HflK family 76 97 1.4E-63
Gene3D G3DSA:6.10.250.2090 - - - 170 223 2.9E-23
Gene3D G3DSA:3.30.479.30 Band 7 domain IPR036013 Band 7/SPFH domain superfamily 59 169 7.5E-35
SMART SM00244 PHB_4 IPR001107 Band 7 domain 22 179 3.0E-64
CDD cd08826 SPFH_eoslipins_u1 - - 54 231 3.08765E-115
PANTHER PTHR10264 BAND 7 PROTEIN-RELATED IPR043202 Band-7 stomatin-like 9 251 3.0E-88

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.