Pseudomonas putida S16, PPS_0173
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 125 | 145 | - |
| SUPERFAMILY | SSF141322 | NfeD domain-like | - | - | 375 | 440 | 1.57E-6 |
| PANTHER | PTHR33507 | INNER MEMBRANE PROTEIN YBBJ | - | - | 11 | 441 | 9.3E-103 |
| CDD | cd07020 | Clp_protease_NfeD_1 | - | - | 28 | 224 | 1.1854E-101 |
| FunFam | G3DSA:3.90.226.10:FF:000089 | Membrane-bound serine protease | - | - | 22 | 251 | 1.1E-91 |
| Gene3D | G3DSA:2.40.50.140 | - | IPR012340 | Nucleic acid-binding, OB-fold | 378 | 446 | 6.2E-10 |
| Gene3D | G3DSA:3.90.226.10 | - | - | - | 22 | 250 | 6.4E-64 |
| SUPERFAMILY | SSF52096 | ClpP/crotonase | IPR029045 | ClpP/crotonase-like domain superfamily | 26 | 201 | 4.97E-29 |
| Pfam | PF01957 | NfeD-like C-terminal, partner-binding | IPR002810 | NfeD-like, C-terminal domain | 356 | 438 | 2.3E-11 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.