Pseudomonas putida S16, PPS_0431
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0042834 | peptidoglycan binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF04225
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:2.70.70.10 | Glucose Permease (Domain IIA) | IPR011055 | Duplicated hybrid motif | 305 | 437 | 1.2E-90 |
| Gene3D | G3DSA:3.10.450.350 | - | - | - | 209 | 458 | 1.2E-90 |
| FunFam | G3DSA:2.70.70.10:FF:000002 | Murein DD-endopeptidase MepM | - | - | 307 | 436 | 2.5E-50 |
| Gene3D | G3DSA:3.10.450.350 | - | - | - | 103 | 194 | 1.7E-17 |
| Pfam | PF19425 | Csd3 second domain | IPR045834 | Csd3-like, second N-terminal domain | 202 | 321 | 4.5E-16 |
| PANTHER | PTHR21666 | PEPTIDASE-RELATED | - | - | 103 | 433 | 4.5E-42 |
| CDD | cd12797 | M23_peptidase | - | - | 335 | 420 | 2.07059E-40 |
| SUPERFAMILY | SSF51261 | Duplicated hybrid motif | IPR011055 | Duplicated hybrid motif | 181 | 431 | 6.8E-74 |
| Pfam | PF01551 | Peptidase family M23 | IPR016047 | Peptidase M23 | 334 | 430 | 3.9E-32 |
| Pfam | PF04225 | Opacity-associated protein A LysM-like domain | IPR007340 | Opacity-associated protein A | 110 | 187 | 3.1E-9 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 47 | 111 | - |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.