Pseudomonas putida S16, PPS_0839

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0019430	removal of superoxide radicals	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01292	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0005737	cytoplasm	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01292	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0004791	thioredoxin-disulfide reductase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01292	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016491	oxidoreductase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF07992	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	ppt00240	Pyrimidine metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	ppt00450	Selenocompound metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
NCBIfam	TIGR01292	JCVI: thioredoxin-disulfide reductase	IPR005982	Thioredoxin reductase	20	324	1.0E-120
Gene3D	G3DSA:3.50.50.60	-	IPR036188	FAD/NAD(P)-binding domain superfamily	130	255	0.0
PRINTS	PR00469	Pyridine nucleotide disulphide reductase class-II signature	-	-	74	84	2.2E-77
PRINTS	PR00469	Pyridine nucleotide disulphide reductase class-II signature	-	-	20	42	2.2E-77
PRINTS	PR00469	Pyridine nucleotide disulphide reductase class-II signature	-	-	119	127	2.2E-77
Pfam	PF07992	Pyridine nucleotide-disulphide oxidoreductase	IPR023753	FAD/NAD(P)-binding domain	20	311	8.2E-53
PRINTS	PR00368	FAD-dependent pyridine nucleotide reductase signature	-	-	277	299	4.9E-41
PRINTS	PR00469	Pyridine nucleotide disulphide reductase class-II signature	-	-	287	305	2.2E-77
PANTHER	PTHR48105	THIOREDOXIN REDUCTASE 1-RELATED-RELATED	-	-	18	325	1.1E-101
PRINTS	PR00469	Pyridine nucleotide disulphide reductase class-II signature	-	-	156	180	2.2E-77
PRINTS	PR00368	FAD-dependent pyridine nucleotide reductase signature	-	-	21	40	4.9E-41
PRINTS	PR00469	Pyridine nucleotide disulphide reductase class-II signature	-	-	249	270	2.2E-77
SUPERFAMILY	SSF51905	FAD/NAD(P)-binding domain	IPR036188	FAD/NAD(P)-binding domain superfamily	13	325	1.3E-57
Gene3D	G3DSA:3.50.50.60	-	IPR036188	FAD/NAD(P)-binding domain superfamily	21	324	0.0
PRINTS	PR00368	FAD-dependent pyridine nucleotide reductase signature	-	-	247	263	4.9E-41
PRINTS	PR00469	Pyridine nucleotide disulphide reductase class-II signature	-	-	211	227	2.2E-77
PRINTS	PR00469	Pyridine nucleotide disulphide reductase class-II signature	-	-	141	153	2.2E-77
PRINTS	PR00469	Pyridine nucleotide disulphide reductase class-II signature	-	-	53	68	2.2E-77
PRINTS	PR00368	FAD-dependent pyridine nucleotide reductase signature	-	-	118	136	4.9E-41
PRINTS	PR00368	FAD-dependent pyridine nucleotide reductase signature	-	-	160	178	4.9E-41

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.