Pseudomonas putida S16, PPS_1517

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PTHR30451	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0015473	fimbrial usher porin activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PTHR30451	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0009297	pilus assembly	ISM Inferred from Sequence Model Term mapped from: InterPro:PTHR30451	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:2.60.40.2070	-	IPR043142	PapC-like, C-terminal domain superfamily	335	422	2.5E-17
PANTHER	PTHR30451	OUTER MEMBRANE USHER PROTEIN	IPR000015	Outer membrane usher protein	3	414	7.8E-106
Gene3D	G3DSA:2.60.40.2610	Outer membrane usher protein FimD, plug domain	IPR042186	Outer membrane usher protein FimD, plug domain	244	333	1.1E-26
Pfam	PF00577	Outer membrane usher protein	IPR000015	Outer membrane usher protein	2	329	2.9E-79
Pfam	PF13953	PapC C-terminal domain	IPR025949	PapC-like, C-terminal domain	339	395	1.1E-15

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.