Pseudomonas putida S16, PPS_4125

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0016887	ATPase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00382	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0005524	ATP binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00005	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	ppt02024	Quorum sensing	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	ppt02010	ABC transporters	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
FunFam	G3DSA:3.40.50.300:FF:000317	Amino acid ABC transporter ATP-binding protein	-	-	4	254	0.0
CDD	cd03219	ABC_Mj1267_LivG_branched	-	-	6	247	1.14103E-124
Pfam	PF00005	ABC transporter	IPR003439	ABC transporter-like, ATP-binding domain	22	181	6.3E-35
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	1	253	1.5E-64
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	IPR027417	P-loop containing nucleoside triphosphate hydrolase	5	253	1.36E-64
SMART	SM00382	AAA_5	IPR003593	AAA+ ATPase domain	30	231	4.3E-11
Pfam	PF12399	Branched-chain amino acid ATP-binding cassette transporter	IPR032823	Branched-chain amino acid ATP-binding cassette transporter, C-terminal	233	255	5.7E-12
PANTHER	PTHR45772	CONSERVED COMPONENT OF ABC TRANSPORTER FOR NATURAL AMINO ACIDS-RELATED	-	-	1	255	7.4E-129

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.