Pseudomonas putida BIRD-1, PPUBIRD1_0096 (fmt)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50486
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009058 biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00551
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004479 methionyl-tRNA formyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd08646
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0071951 conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00182
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppb00970 Aminoacyl-tRNA biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppb00670 One carbon pool by folate 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.170 - - - 1 205 4.8E-75
CDD cd08646 FMT_core_Met-tRNA-FMT_N IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain 1 204 1.96861E-116
SUPERFAMILY SSF50486 FMT C-terminal domain-like IPR011034 Formyl transferase-like, C-terminal domain superfamily 204 302 1.41E-32
Gene3D G3DSA:3.10.25.10 - IPR037022 Formyl transferase, C-terminal domain superfamily 206 308 7.5E-33
Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. IPR005794 Methionyl-tRNA formyltransferase 1 301 37.125641
CDD cd08704 Met_tRNA_FMT_C IPR044135 Methionyl-tRNA formyltransferase, C-terminal domain 207 290 8.31468E-36
Pfam PF00551 Formyl transferase IPR002376 Formyl transferase, N-terminal 1 180 6.8E-46
PANTHER PTHR11138 METHIONYL-TRNA FORMYLTRANSFERASE - - 1 302 1.2E-80
NCBIfam TIGR00460 JCVI: methionyl-tRNA formyltransferase IPR005794 Methionyl-tRNA formyltransferase 1 302 1.1E-94
Pfam PF02911 Formyl transferase, C-terminal domain IPR005793 Formyl transferase, C-terminal 203 298 5.8E-28
FunFam G3DSA:3.40.50.170:FF:000003 Methionyl-tRNA formyltransferase - - 1 205 1.3E-102
SUPERFAMILY SSF53328 Formyltransferase IPR036477 Formyl transferase, N-terminal domain superfamily 1 206 6.93E-68

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.