Pseudomonas putida BIRD-1, PPUBIRD1_3943
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0016491 | oxidoreductase activity |
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.109.10
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | ppb01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | ppb00740 | Riboflavin metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF00881 | Nitroreductase family | IPR029479 | Nitroreductase | 18 | 181 | 1.0E-25 |
| NCBIfam | TIGR02476 | JCVI: 5,6-dimethylbenzimidazole synthase | IPR012825 | 5,6-dimethylbenzimidazole synthase BluB | 6 | 207 | 8.1E-70 |
| SUPERFAMILY | SSF55469 | FMN-dependent nitroreductase-like | IPR000415 | Nitroreductase-like | 14 | 213 | 1.57E-46 |
| Gene3D | G3DSA:3.40.109.10 | NADH Oxidase | IPR000415 | Nitroreductase-like | 1 | 187 | 2.2E-42 |
| PANTHER | PTHR23026 | NADPH NITROREDUCTASE | - | - | 10 | 203 | 5.7E-32 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.