Pseudomonas putida BIRD-1, PPUBIRD1_4909

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00440	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF46689	Homeodomain-like	IPR009057	Homeobox-like domain superfamily	4	75	6.16E-15
Gene3D	G3DSA:1.10.357.10	Tetracycline Repressor, domain 2	-	-	4	220	3.2E-74
Pfam	PF13972	Bacterial transcriptional repressor	IPR025722	Bacterial transcriptional repressor TetR	60	202	9.1E-44
PRINTS	PR00455	TetR bacterial regulatory protein HTH signature	IPR001647	DNA-binding HTH domain, TetR-type	32	55	8.9E-7
PRINTS	PR00455	TetR bacterial regulatory protein HTH signature	IPR001647	DNA-binding HTH domain, TetR-type	11	24	8.9E-7
PANTHER	PTHR30055	HTH-TYPE TRANSCRIPTIONAL REGULATOR RUTR	-	-	3	158	5.9E-17
Pfam	PF00440	Bacterial regulatory proteins, tetR family	IPR001647	DNA-binding HTH domain, TetR-type	12	54	9.8E-11

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.