Pseudomonas putida BIRD-1, PPUBIRD1_5051
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: TTCGCGGGTA-N54-TACCCGCGAA | 5654808 | 5654881 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: ACCCGCTCCTACAGGG-N20-CCCTGTAGGAGCGGGT | 5654819 | 5654870 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 1174 | 5654820 | 5654869 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CTGGCCTCTTCGCGGGTAAACCCGCTCCTACA-N34-TGTAGGAGCGGGTTTACCCGCGAAGAGGCCAG | 5653374 | 5653471 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 1173 | 5653394 | 5653451 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |