Pseudomonas putida HB3267, B479_00640

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0008725	DNA-3-methyladenine glycosylase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF03352	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006281	DNA repair	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF48150	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006284	base-excision repair	ISM Inferred from Sequence Model Term mapped from: InterPro:PF03352	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003824	catalytic activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF48150	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	ppuh03410	Base excision repair	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF03352	Methyladenine glycosylase	IPR005019	Methyladenine glycosylase	6	177	3.0E-71
PANTHER	PTHR30037	DNA-3-METHYLADENINE GLYCOSYLASE 1	-	-	3	179	9.4E-70
SUPERFAMILY	SSF48150	DNA-glycosylase	IPR011257	DNA glycosylase	1	180	2.88E-74
NCBIfam	TIGR00624	JCVI: DNA-3-methyladenine glycosylase I	IPR004597	DNA-3-methyladenine glycosylase I	3	178	5.4E-85
FunFam	G3DSA:1.10.340.30:FF:000009	DNA-3-methyladenine glycosylase I	-	-	1	182	5.1E-89
Gene3D	G3DSA:1.10.340.30	Hypothetical protein; domain 2	-	-	1	181	1.3E-75

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.