Pseudomonas putida HB3267, B479_01375
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF141322 | NfeD domain-like | - | - | 373 | 440 | 1.7E-7 |
| SUPERFAMILY | SSF52096 | ClpP/crotonase | IPR029045 | ClpP/crotonase-like domain superfamily | 26 | 200 | 1.33E-26 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 125 | 147 | - |
| Gene3D | G3DSA:3.90.226.10 | - | - | - | 22 | 250 | 5.9E-62 |
| FunFam | G3DSA:3.90.226.10:FF:000089 | Membrane-bound serine protease | - | - | 22 | 251 | 1.5E-89 |
| Gene3D | G3DSA:2.40.50.140 | - | IPR012340 | Nucleic acid-binding, OB-fold | 378 | 446 | 1.0E-10 |
| Pfam | PF01957 | NfeD-like C-terminal, partner-binding | IPR002810 | NfeD-like, C-terminal domain | 354 | 438 | 3.3E-12 |
| PANTHER | PTHR33507 | INNER MEMBRANE PROTEIN YBBJ | - | - | 14 | 441 | 1.2E-100 |
| CDD | cd07020 | Clp_protease_NfeD_1 | - | - | 28 | 224 | 2.06915E-99 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.