Pseudomonas putida HB3267, B479_02470 (glpE)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Cellular Component | GO:0005737 | cytoplasm |
Inferred from Sequence Model
Term mapped from: InterPro:MF_01009
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0004792 | thiosulfate sulfurtransferase activity |
Inferred from Sequence Model
Term mapped from: InterPro:MF_01009
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| MetaCyc | sulfide oxidation IV (metazoa) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| KEGG | ppuh01110 | Biosynthesis of secondary metabolites | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | ppuh01120 | Microbial metabolism in diverse environments | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | ppuh00920 | Sulfur metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| MetaCyc | thiosulfate disproportionation IV (rhodanese) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SMART | SM00450 | rhod_4 | IPR001763 | Rhodanese-like domain | 7 | 101 | 1.7E-20 |
| PANTHER | PTHR43031 | FAD-DEPENDENT OXIDOREDUCTASE | - | - | 3 | 99 | 3.4E-17 |
| Pfam | PF00581 | Rhodanese-like domain | IPR001763 | Rhodanese-like domain | 10 | 97 | 5.1E-15 |
| CDD | cd01444 | GlpE_ST | IPR023695 | Thiosulfate sulfurtransferase, bacterial | 6 | 97 | 5.0421E-34 |
| SUPERFAMILY | SSF52821 | Rhodanese/Cell cycle control phosphatase | IPR036873 | Rhodanese-like domain superfamily | 1 | 100 | 4.45E-27 |
| Gene3D | G3DSA:3.40.250.10 | - | IPR036873 | Rhodanese-like domain superfamily | 1 | 107 | 1.8E-26 |
| Hamap | MF_01009 | Thiosulfate sulfurtransferase GlpE [glpE]. | IPR023695 | Thiosulfate sulfurtransferase, bacterial | 2 | 104 | 30.838123 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.