Pseudomonas putida HB3267, B479_02580

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
MetaCyc		4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis	InterPro 5.36-75.0	ECO:0000259 match to InterPro signature evidence used in automatic assertion
KEGG	ppuh01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	ppuh02025	Biofilm formation - Pseudomonas aeruginosa	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	ppuh02024	Quorum sensing	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	ppuh01230	Biosynthesis of amino acids	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
MetaCyc		acridone alkaloid biosynthesis	InterPro 5.36-75.0	ECO:0000259 match to InterPro signature evidence used in automatic assertion
KEGG	ppuh01130	Biosynthesis of antibiotics	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	ppuh00400	Phenylalanine, tyrosine and tryptophan biosynthesis	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	ppuh01110	Biosynthesis of secondary metabolites	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00097	Anthranilate synthase component II signature	-	-	99	107	5.3E-37
PRINTS	PR00096	Glutamine amidotransferase superfamily signature	-	-	74	85	1.3E-13
PRINTS	PR00096	Glutamine amidotransferase superfamily signature	-	-	169	182	1.3E-13
FunFam	G3DSA:3.40.50.880:FF:000003	Anthranilate synthase component II	-	-	1	194	7.8E-90
PRINTS	PR00099	Carbamoyl-phosphate synthase protein GATase domain signature	-	-	74	90	6.6E-6
SUPERFAMILY	SSF52317	Class I glutamine amidotransferase-like	IPR029062	Class I glutamine amidotransferase-like	1	192	6.42E-56
CDD	cd01743	GATase1_Anthranilate_Synthase	IPR006221	Anthranilate synthase/para-aminobenzoate synthase like domain	2	190	1.38602E-111
PRINTS	PR00096	Glutamine amidotransferase superfamily signature	-	-	47	56	1.3E-13
PRINTS	PR00097	Anthranilate synthase component II signature	-	-	169	182	5.3E-37
PANTHER	PTHR43418	MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED	-	-	2	194	2.1E-87
PRINTS	PR00097	Anthranilate synthase component II signature	-	-	47	56	5.3E-37
NCBIfam	TIGR00566	JCVI: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase	IPR006221	Anthranilate synthase/para-aminobenzoate synthase like domain	1	191	3.5E-87
PRINTS	PR00097	Anthranilate synthase component II signature	-	-	2	16	5.3E-37
PRINTS	PR00097	Anthranilate synthase component II signature	-	-	119	131	5.3E-37
Pfam	PF00117	Glutamine amidotransferase class-I	IPR017926	Glutamine amidotransferase	4	191	3.4E-56
PRINTS	PR00097	Anthranilate synthase component II signature	-	-	74	85	5.3E-37
Gene3D	G3DSA:3.40.50.880	-	IPR029062	Class I glutamine amidotransferase-like	1	194	9.7E-62
PRINTS	PR00099	Carbamoyl-phosphate synthase protein GATase domain signature	-	-	44	58	6.6E-6

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.