Pseudomonas putida HB3267, B479_06305

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00304	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0000155	phosphorelay sensor kinase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:cd00082	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016772	transferase activity, transferring phosphorus-containing groups	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00344	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0016310	phosphorylation	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00344	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0007165	signal transduction	ISM Inferred from Sequence Model Term mapped from: InterPro:cd00082	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	ppuh02020	Two-component system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:1.10.8.500	HAMP domain in histidine kinase	-	-	177	225	1.2E-9
PANTHER	PTHR45436	SENSOR HISTIDINE KINASE YKOH	-	-	10	447	6.6E-50
Pfam	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	IPR003594	Histidine kinase/HSP90-like ATPase	341	445	4.8E-15
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	408	426	9.3E-9
Gene3D	G3DSA:1.10.287.130	-	-	-	226	287	8.8E-13
SUPERFAMILY	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	282	449	4.85E-34
CDD	cd00082	HisKA	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	232	287	9.17367E-8
Pfam	PF16750	Sensor domain of 2-component histidine kinase	IPR031930	Two-component histidine kinase, sensor domain	39	148	8.1E-38
SMART	SM00388	HisKA_10	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	233	292	8.4E-10
SUPERFAMILY	SSF158472	HAMP domain-like	-	-	177	230	7.32E-8
SMART	SM00387	HKATPase_4	IPR003594	Histidine kinase/HSP90-like ATPase	337	447	5.1E-24
Coils	Coil	Coil	-	-	262	282	-
Pfam	PF00512	His Kinase A (phospho-acceptor) domain	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	233	291	3.2E-9
SMART	SM00304	HAMP_11	IPR003660	HAMP domain	177	232	1.1E-10
Gene3D	G3DSA:3.30.450.170	-	IPR038428	Two-component histidine kinase, sensor domain superfamily	26	149	4.1E-38
SUPERFAMILY	SSF47384	Homodimeric domain of signal transducing histidine kinase	IPR036097	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily	216	292	2.16E-11
CDD	cd06225	HAMP	-	-	182	227	1.2002E-9
Pfam	PF00672	HAMP domain	IPR003660	HAMP domain	175	228	2.9E-9
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	392	402	9.3E-9
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	374	388	9.3E-9
Gene3D	G3DSA:3.30.565.10	-	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	305	449	1.2E-29

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.